Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ghkl domain-containing protein | SAMN04487831_10717 | Not Available | Positive | 2173816 - 2175120 | 49841.7 |
| two component transcriptional regulator, lyttr family | SAMN04487831_10718 | Not Available | Positive | 2175139 - 2175858 | 27673.8 |
| thiopeptide-type bacteriocin biosynthesis domain-containing protein | SAMN04487831_10719 | Not Available | Positive | 2176017 - 2179034 | 116797.0 |
| abc-type multidrug transport system, atpase and permease component | SAMN04487831_10720 | Not Available | Positive | 2179045 - 2180847 | 68397.2 |
| lanthionine synthetase c-like protein | SAMN04487831_10721 | Not Available | Positive | 2180852 - 2182141 | 47237.4 |
| lantibiotic, gallidermin/nisin family | SAMN04487831_10722 | Not Available | Positive | 2182272 - 2182445 | 6112.35 |
| lantibiotic, gallidermin/nisin family | SAMN04487831_10723 | Not Available | Positive | 2182512 - 2182688 | 6184.4 |
| lantibiotic, gallidermin/nisin family | SAMN04487831_10724 | Not Available | Positive | 2182762 - 2182938 | 6013.19 |
| lantibiotic, gallidermin/nisin family | SAMN04487831_10725 | Not Available | Positive | 2183012 - 2183188 | 6043.22 |
| abc-2 type transport system atp-binding protein | SAMN04487831_10726 | Not Available | Positive | 2183321 - 2184016 | 25452.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
