Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SAMN04487831_101191 | Not Available | Negative | 184469 - 187318 | 105518.0 |
| rod shape-determining protein mred | SAMN04487831_101192 | Not Available | Negative | 187305 - 187850 | 20823.2 |
| rod shape-determining protein mrec | SAMN04487831_101193 | Not Available | Negative | 187843 - 188706 | 31363.3 |
| rod shape-determining protein mreb | SAMN04487831_101194 | Not Available | Negative | 188719 - 189732 | 36694.4 |
| cystathionine beta-lyase family protein involved in aluminum resistance | SAMN04487831_101195 | Not Available | Negative | 189782 - 191068 | 45992.2 |
| trna dimethylallyltransferase | SAMN04487831_101196 | Not Available | Negative | 191070 - 192008 | 35794.3 |
| dna mismatch repair protein mutl | SAMN04487831_101197 | Not Available | Negative | 192008 - 193891 | 70431.1 |
| dna mismatch repair protein muts | SAMN04487831_101198 | Not Available | Negative | 193891 - 196500 | 98003.0 |
| hypothetical protein | SAMN04487831_101199 | Not Available | Negative | 196520 - 198103 | 58012.0 |
| hypothetical protein | SAMN04487831_101200 | Not Available | Negative | 198104 - 199315 | 44631.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
