Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative multiple sugar transport system substrate-binding protein | SAMN04487831_10111 | Not Available | Positive | 9508 - 10647 | 40918.1 |
| putative multiple sugar transport system atp-binding protein | SAMN04487831_10112 | Not Available | Positive | 10714 - 12276 | 57312.4 |
| putative multiple sugar transport system permease protein | SAMN04487831_10113 | Not Available | Positive | 12266 - 13432 | 41494.5 |
| helix-turn-helix domain-containing protein | SAMN04487831_10114 | Not Available | Positive | 13504 - 14283 | 30492.3 |
| two-component system, sensor histidine kinase yesm | SAMN04487831_10115 | Not Available | Positive | 14284 - 16101 | 69462.6 |
| ribose transport system substrate-binding protein | SAMN04487831_10116 | Not Available | Positive | 16091 - 17038 | 35473.9 |
| methyl-galactoside transport system substrate-binding protein | SAMN04487831_10117 | Not Available | Positive | 17051 - 18088 | 38490.9 |
| hypothetical protein | SAMN04487831_10118 | Not Available | Positive | 18137 - 18997 | 33671.7 |
| glutaminyl-trna synthetase | SAMN04487831_10119 | Not Available | Positive | 19033 - 20703 | 63974.5 |
| hypothetical protein | SAMN04487831_10120 | Not Available | Positive | 20733 - 21614 | 33078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
