Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_106160 | Not Available | Negative | 2145639 - 2145851 | 7855.64 |
| hypothetical protein | SAMN04487831_106161 | Not Available | Negative | 2146080 - 2147357 | 48710.8 |
| hypothetical protein | SAMN04487831_106162 | Not Available | Negative | 2147528 - 2148451 | 35460.4 |
| hypothetical protein | SAMN04487831_106163 | Not Available | Negative | 2148631 - 2149473 | 31285.9 |
| cyclic lactone autoinducer peptide | SAMN04487831_106164 | Not Available | Negative | 2149545 - 2149790 | 9292.61 |
| ghkl domain-containing protein | SAMN04487831_106165 | Not Available | Positive | 2149860 - 2151218 | 51429.1 |
| two component transcriptional regulator, lyttr family | SAMN04487831_106166 | Not Available | Positive | 2151199 - 2151900 | 26350.4 |
| accessory gene regulator b | SAMN04487831_106167 | Not Available | Positive | 2151917 - 2152489 | 21894.4 |
| hypothetical protein | SAMN04487831_106168 | Not Available | Positive | 2152713 - 2153207 | 17413.3 |
| hypothetical protein | SAMN04487831_106169 | Not Available | Positive | 2153381 - 2154019 | 23372.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
