Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_106130 | Not Available | Negative | 2114900 - 2115508 | 23385.1 |
| sigma-70, region 4 | SAMN04487831_106131 | Not Available | Negative | 2116115 - 2116639 | 20536.4 |
| hypothetical protein | SAMN04487831_106132 | Not Available | Negative | 2116963 - 2117202 | 9182.38 |
| wobble nucleotide-excising trnase | SAMN04487831_106133 | Not Available | Negative | 2117455 - 2119638 | 85023.7 |
| toxin secretion/phage lysis holin | SAMN04487831_106134 | Not Available | Negative | 2119890 - 2120339 | 16759.9 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487831_106135 | Not Available | Negative | 2120329 - 2120880 | 21375.5 |
| hypothetical protein | SAMN04487831_106136 | Not Available | Negative | 2121081 - 2121908 | 31061.8 |
| accessory gene regulator b | SAMN04487831_106137 | Not Available | Negative | 2122169 - 2122744 | 21995.9 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487831_106138 | Not Available | Positive | 2123160 - 2123486 | 12537.2 |
| two component transcriptional regulator, lyttr family | SAMN04487831_106139 | Not Available | Positive | 2123581 - 2124288 | 27715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
