Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_106110 | Not Available | Negative | 2086386 - 2086862 | 17884.4 |
| transcriptional regulator, spx/mgsr family | SAMN04487831_106111 | Not Available | Negative | 2087054 - 2087395 | 12902.6 |
| protein of unknown function | SAMN04487831_106112 | Not Available | Negative | 2087407 - 2088027 | 23739.1 |
| ribonuclease-3 | SAMN04487831_106113 | Not Available | Negative | 2088247 - 2089368 | 43561.7 |
| serine/threonine-protein kinase hipa | SAMN04487831_106114 | Not Available | Negative | 2089926 - 2091122 | 45325.7 |
| helix-turn-helix | SAMN04487831_106115 | Not Available | Negative | 2091109 - 2091396 | 10868.2 |
| rhamnulose-1-phosphate aldolase | SAMN04487831_106116 | Not Available | Negative | 2091497 - 2092324 | 31200.4 |
| l-arabinose isomerase | SAMN04487831_106117 | Not Available | Negative | 2092337 - 2093758 | 51818.1 |
| rhamnulokinase | SAMN04487831_106118 | Not Available | Negative | 2093752 - 2095173 | 52920.1 |
| arac-type dna-binding protein | SAMN04487831_106119 | Not Available | Positive | 2095257 - 2096252 | 38263.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
