Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_106100 | Not Available | Negative | 2079994 - 2080155 | 6238.34 |
| hypothetical protein | SAMN04487831_106101 | Not Available | Negative | 2080303 - 2080764 | 16859.2 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN04487831_106102 | Not Available | Negative | 2080858 - 2081337 | 17650.9 |
| transporter family protein | SAMN04487831_106103 | Not Available | Negative | 2081497 - 2081910 | 14679.6 |
| hypothetical protein | SAMN04487831_106104 | Not Available | Negative | 2081934 - 2082146 | 8320.7 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04487831_106105 | Not Available | Negative | 2082183 - 2082818 | 22994.7 |
| hypothetical protein | SAMN04487831_106106 | Not Available | Negative | 2083137 - 2083268 | 5148.22 |
| fic family protein | SAMN04487831_106107 | Not Available | Negative | 2083570 - 2084625 | 40559.6 |
| isopentenyldiphosphate isomerase | SAMN04487831_106108 | Not Available | Negative | 2084829 - 2085668 | 32155.4 |
| uncharacterized conserved protein ybbk, duf523 family | SAMN04487831_106109 | Not Available | Negative | 2085862 - 2086278 | 14906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
