Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, spx/mgsr family | SAMN04487831_10690 | Not Available | Negative | 2070073 - 2070414 | 12869.6 |
| inner membrane component domain-containing protein | SAMN04487831_10691 | Not Available | Negative | 2070428 - 2070610 | 6665.55 |
| hnh endonuclease | SAMN04487831_10692 | Not Available | Negative | 2070631 - 2070942 | 12024.6 |
| 8-oxo-dgtp diphosphatase | SAMN04487831_10693 | Not Available | Negative | 2070972 - 2071370 | 14891.7 |
| helicase conserved c-terminal domain-containing protein | SAMN04487831_10694 | Not Available | Negative | 2071384 - 2074356 | 114535.0 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04487831_10695 | Not Available | Negative | 2074384 - 2074704 | 12401.6 |
| hypothetical protein | SAMN04487831_10696 | Not Available | Negative | 2074716 - 2076470 | 68112.8 |
| helicase conserved c-terminal domain-containing protein | SAMN04487831_10697 | Not Available | Negative | 2076484 - 2077893 | 54968.8 |
| hkd family nuclease | SAMN04487831_10698 | Not Available | Negative | 2078014 - 2078964 | 35894.2 |
| methyltransferase domain-containing protein | SAMN04487831_10699 | Not Available | Negative | 2078925 - 2079530 | 22953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
