Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | SAMN04487831_101181 | Not Available | Negative | 176291 - 176812 | 20073.2 |
| 3-dehydroquinate synthase | SAMN04487831_101182 | Not Available | Negative | 176812 - 177900 | 40074.4 |
| cell division inhibitor sepf | SAMN04487831_101183 | Not Available | Negative | 177967 - 178479 | 19267.8 |
| hypothetical protein | SAMN04487831_101184 | Not Available | Negative | 178497 - 179201 | 26411.0 |
| hypothetical protein | SAMN04487831_101185 | Not Available | Negative | 179218 - 180603 | 52449.4 |
| hypothetical protein | SAMN04487831_101186 | Not Available | Negative | 180669 - 181091 | 15657.8 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04487831_101187 | Not Available | Negative | 181284 - 182273 | 35657.0 |
| methylglyoxal synthase | SAMN04487831_101188 | Not Available | Negative | 182248 - 182643 | 14669.8 |
| rod shape determining protein roda | SAMN04487831_101189 | Not Available | Negative | 182644 - 183759 | 40866.5 |
| septum site-determining protein minc | SAMN04487831_101190 | Not Available | Negative | 183760 - 184440 | 25038.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
