Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | SAMN04487831_10680 | Not Available | Negative | 2058479 - 2062279 | 140036.0 |
| rad3-related dna helicase | SAMN04487831_10681 | Not Available | Negative | 2062424 - 2064829 | 93084.2 |
| pts hpr component phosphorylation site | SAMN04487831_10682 | Not Available | Negative | 2064900 - 2065124 | 8028.63 |
| eal and modified hd-gyp domain-containing signal transduction protein | SAMN04487831_10683 | Not Available | Negative | 2065323 - 2066546 | 45963.5 |
| 8-oxo-dgtp diphosphatase | SAMN04487831_10684 | Not Available | Negative | 2066709 - 2067122 | 15627.5 |
| hypothetical protein | SAMN04487831_10685 | Not Available | Negative | 2067448 - 2067783 | 12731.2 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04487831_10686 | Not Available | Negative | 2067870 - 2068700 | 31325.2 |
| hypothetical protein | SAMN04487831_10687 | Not Available | Negative | 2068648 - 2069148 | 19379.4 |
| hypothetical protein | SAMN04487831_10688 | Not Available | Positive | 2069362 - 2069661 | 11532.0 |
| hypothetical protein | SAMN04487831_10689 | Not Available | Negative | 2069891 - 2070070 | 6770.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
