Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha galactosidase a | SAMN04487831_10670 | Not Available | Negative | 2048549 - 2049838 | 49692.7 |
| nucleotidyltransferase substrate binding protein, hi0074 family | SAMN04487831_10671 | Not Available | Negative | 2049994 - 2050398 | 15681.7 |
| nucleotidyltransferase domain-containing protein | SAMN04487831_10672 | Not Available | Negative | 2050379 - 2050669 | 11286.3 |
| tigr00659 family protein | SAMN04487831_10673 | Not Available | Negative | 2050773 - 2051465 | 24229.2 |
| holin-like protein | SAMN04487831_10674 | Not Available | Negative | 2051465 - 2051824 | 13023.0 |
| hypothetical protein | SAMN04487831_10675 | Not Available | Negative | 2051902 - 2052384 | 18683.2 |
| precorrin-2/cobalt-factor-2 c20-methyltransferase | SAMN04487831_10676 | Not Available | Negative | 2052388 - 2053086 | 25920.8 |
| hypothetical protein | SAMN04487831_10677 | Not Available | Negative | 2053175 - 2054065 | 32416.8 |
| carbamoyl-phosphate synthase large subunit | SAMN04487831_10678 | Not Available | Negative | 2054137 - 2057337 | 117485.0 |
| carbamoyl-phosphate synthase small subunit | SAMN04487831_10679 | Not Available | Negative | 2057337 - 2058407 | 38878.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
