Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN04487831_10649 | Not Available | Negative | 2022142 - 2023722 | 60139.5 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04487831_10650 | Not Available | Negative | 2023739 - 2024176 | 16474.7 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04487831_10651 | Not Available | Negative | 2024345 - 2025166 | 31765.7 |
| hypothetical protein | SAMN04487831_10652 | Not Available | Negative | 2025180 - 2025671 | 18589.7 |
| anti-sigma b factor antagonist | SAMN04487831_10653 | Not Available | Negative | 2025731 - 2026030 | 11044.3 |
| hypothetical protein | SAMN04487831_10654 | Not Available | Negative | 2026165 - 2026836 | 25171.0 |
| putative efflux protein, mate family | SAMN04487831_10655 | Not Available | Negative | 2026973 - 2028325 | 49028.7 |
| flavodoxin, short chain | SAMN04487831_10656 | Not Available | Negative | 2028569 - 2029000 | 14572.0 |
| protein of unknown function | SAMN04487831_10657 | Not Available | Negative | 2028997 - 2029569 | 22645.3 |
| pp_01834 | SAMN04487831_10658 | Not Available | Negative | 2029720 - 2030784 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
