Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | SAMN04487831_10639 | Not Available | Negative | 2004944 - 2005780 | 31960.8 |
| hypothetical protein | SAMN04487831_10640 | Not Available | Negative | 2006154 - 2007128 | 36576.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN04487831_10641 | Not Available | Negative | 2007247 - 2009685 | 87683.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04487831_10642 | Not Available | Negative | 2009691 - 2010593 | 34660.1 |
| hypothetical protein | SAMN04487831_10643 | Not Available | Negative | 2010728 - 2011657 | 33451.5 |
| response regulator receiver domain-containing protein | SAMN04487831_10644 | Not Available | Negative | 2011825 - 2012580 | 28515.8 |
| hypothetical protein | SAMN04487831_10645 | Not Available | Negative | 2012602 - 2013234 | 23765.3 |
| hd domain-containing protein | SAMN04487831_10646 | Not Available | Negative | 2013322 - 2015682 | 89741.0 |
| signal transduction histidine kinase | SAMN04487831_10647 | Not Available | Negative | 2015702 - 2019937 | 158168.0 |
| response regulator c-di-gmp phosphodiesterase, rpfg family, contains rec and hd-gyp domains | SAMN04487831_10648 | Not Available | Negative | 2019937 - 2022105 | 80677.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
