Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system atp-binding protein | SAMN04487831_10619 | Not Available | Positive | 1987196 - 1988263 | 40242.5 |
| spermidine/putrescine transport system permease protein | SAMN04487831_10620 | Not Available | Positive | 1988256 - 1989083 | 30240.1 |
| spermidine/putrescine transport system permease protein | SAMN04487831_10621 | Not Available | Positive | 1989080 - 1989865 | 28918.2 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04487831_10622 | Not Available | Positive | 1989865 - 1990932 | 41046.1 |
| hypothetical protein | SAMN04487831_10623 | Not Available | Negative | 1991047 - 1991676 | 23942.8 |
| dna repair protein recn (recombination protein n) | SAMN04487831_10624 | Not Available | Negative | 1991776 - 1993455 | 61945.3 |
| transcriptional regulator, argr family | SAMN04487831_10625 | Not Available | Negative | 1993510 - 1993965 | 16909.6 |
| nad+ kinase | SAMN04487831_10626 | Not Available | Negative | 1993966 - 1994811 | 30965.0 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN04487831_10627 | Not Available | Negative | 1994811 - 1995608 | 29166.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04487831_10628 | Not Available | Negative | 1995618 - 1997474 | 68359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
