Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain-like | SAMN04487831_105254 | Not Available | Positive | 1956844 - 1958457 | 55811.6 |
| hypothetical protein | SAMN04487831_105255 | Not Available | Negative | 1958698 - 1958859 | 6247.92 |
| hypothetical protein | SAMN04487831_1061 | Not Available | Negative | 1958860 - 1959044 | 7008.55 |
| methyl-accepting chemotaxis protein | SAMN04487831_1062 | Not Available | Negative | 1959497 - 1961221 | 62766.9 |
| arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein | SAMN04487831_1063 | Not Available | Negative | 1961234 - 1962673 | 51526.0 |
| gggtgrt protein | SAMN04487831_1064 | Not Available | Negative | 1962805 - 1963815 | 35735.6 |
| nifu homolog involved in fe-s cluster formation | SAMN04487831_1065 | Not Available | Negative | 1963837 - 1964529 | 24804.7 |
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN04487831_1066 | Not Available | Negative | 1964734 - 1967115 | 90371.6 |
| two component regulator propeller | SAMN04487831_1067 | Not Available | Negative | 1967132 - 1971160 | 151541.0 |
| hd domain-containing protein | SAMN04487831_1068 | Not Available | Negative | 1971160 - 1973289 | 81194.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
