Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | SAMN04487831_101171 | Not Available | Positive | 167935 - 168222 | 10692.1 |
| nicotinate-nucleotide adenylyltransferase | SAMN04487831_101172 | Not Available | Positive | 168232 - 169425 | 45634.4 |
| ribosome-associated protein | SAMN04487831_101173 | Not Available | Positive | 169429 - 169776 | 13228.8 |
| repressor lexa | SAMN04487831_101174 | Not Available | Negative | 169819 - 170433 | 22747.5 |
| lysm domain-containing protein | SAMN04487831_101175 | Not Available | Positive | 170613 - 170945 | 12672.2 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04487831_101176 | Not Available | Positive | 171037 - 172662 | 62669.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04487831_101177 | Not Available | Positive | 172722 - 173471 | 28578.2 |
| hypothetical protein | SAMN04487831_101178 | Not Available | Positive | 173672 - 174130 | 17884.1 |
| site-specific recombinase xerd | SAMN04487831_101179 | Not Available | Positive | 174314 - 175378 | 40975.9 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04487831_101180 | Not Available | Negative | 175375 - 176289 | 34123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
