Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose o-acetyltransferase | SAMN04487831_105224 | Not Available | Positive | 1926113 - 1926727 | 22933.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04487831_105225 | Not Available | Positive | 1926737 - 1927660 | 33421.0 |
| aaa domain-containing protein | SAMN04487831_105226 | Not Available | Positive | 1927707 - 1928471 | 30235.8 |
| hypothetical protein | SAMN04487831_105227 | Not Available | Positive | 1928544 - 1928714 | 6548.78 |
| aldo/keto reductase | SAMN04487831_105228 | Not Available | Positive | 1928750 - 1929604 | 32241.1 |
| protein of unknown function duf20 | SAMN04487831_105229 | Not Available | Positive | 1929614 - 1930090 | 17106.0 |
| hypothetical protein | SAMN04487831_105230 | Not Available | Positive | 1930132 - 1930848 | 25874.3 |
| ribosomal protein s18 acetylase rimi | SAMN04487831_105231 | Not Available | Positive | 1930859 - 1931782 | 35177.9 |
| muramoyltetrapeptide carboxypeptidase ldca (peptidoglycan recycling) | SAMN04487831_105232 | Not Available | Positive | 1932164 - 1933006 | 30919.0 |
| arac family transcriptional regulator | SAMN04487831_105233 | Not Available | Positive | 1933106 - 1933942 | 31478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
