Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04487831_105214 | Not Available | Positive | 1917290 - 1917841 | 21490.6 |
| hypothetical protein | SAMN04487831_105215 | Not Available | Positive | 1917852 - 1918148 | 11177.8 |
| major facilitator superfamily protein | SAMN04487831_105216 | Not Available | Positive | 1918303 - 1919391 | 38916.4 |
| spermidine synthase | SAMN04487831_105217 | Not Available | Positive | 1919401 - 1921017 | 59468.4 |
| endonuclease iv | SAMN04487831_105218 | Not Available | Positive | 1921017 - 1921844 | 30576.4 |
| dna-binding transcriptional regulator, merr family | SAMN04487831_105219 | Not Available | Positive | 1921930 - 1922655 | 27416.5 |
| hypothetical protein | SAMN04487831_105220 | Not Available | Positive | 1923190 - 1923717 | 19517.5 |
| acetyltransferase (gnat) family protein | SAMN04487831_105221 | Not Available | Positive | 1923748 - 1924215 | 18522.6 |
| muramoyltetrapeptide carboxypeptidase ldca (peptidoglycan recycling) | SAMN04487831_105222 | Not Available | Positive | 1924225 - 1925247 | 38460.2 |
| hypothetical protein | SAMN04487831_105223 | Not Available | Positive | 1925263 - 1925784 | 20139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
