Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_105174 | Not Available | Positive | 1886199 - 1887686 | 56758.1 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04487831_105175 | Not Available | Negative | 1887743 - 1889176 | 55907.5 |
| cysteine desulfurase / selenocysteine lyase | SAMN04487831_105176 | Not Available | Positive | 1889509 - 1891164 | 61706.4 |
| radical sam superfamily enzyme, moaa/nifb/pqqe/skfb family | SAMN04487831_105177 | Not Available | Negative | 1891203 - 1892297 | 40506.2 |
| pyruvate formate lyase activating enzyme | SAMN04487831_105178 | Not Available | Positive | 1892447 - 1893283 | 31688.7 |
| uncharacterized protein, ph0010 family/ammememoradisam system protein a | SAMN04487831_105179 | Not Available | Positive | 1893302 - 1894687 | 50920.9 |
| hypothetical protein | SAMN04487831_105180 | Not Available | Negative | 1894780 - 1895274 | 19413.2 |
| parb-like nuclease domain-containing protein | SAMN04487831_105181 | Not Available | Negative | 1895267 - 1896145 | 34209.8 |
| ribose 5-phosphate isomerase b | SAMN04487831_105182 | Not Available | Negative | 1896181 - 1896642 | 16725.1 |
| predicted purr-regulated permease perm | SAMN04487831_105183 | Not Available | Positive | 1896968 - 1898098 | 41128.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
