Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN04487831_105164 | Not Available | Positive | 1880001 - 1880459 | 17681.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487831_105165 | Not Available | Positive | 1880471 - 1880983 | 19306.0 |
| uridine phosphorylase | SAMN04487831_105166 | Not Available | Positive | 1880989 - 1881738 | 27589.9 |
| nicotinamidase-related amidase | SAMN04487831_105167 | Not Available | Positive | 1881768 - 1882313 | 20818.6 |
| peptide deformylase | SAMN04487831_105168 | Not Available | Positive | 1882294 - 1882704 | 15355.6 |
| l-amino acid n-acyltransferase ynca | SAMN04487831_105169 | Not Available | Positive | 1882736 - 1883284 | 20879.0 |
| hypothetical protein | SAMN04487831_105170 | Not Available | Positive | 1883324 - 1883887 | 22372.8 |
| protein of unknown function | SAMN04487831_105171 | Not Available | Positive | 1883959 - 1884381 | 15291.8 |
| energy-coupling factor transport system substrate-specific component | SAMN04487831_105172 | Not Available | Positive | 1884341 - 1884919 | 21831.5 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04487831_105173 | Not Available | Positive | 1884969 - 1886066 | 40501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
