Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, response regulator yesn | SAMN04487831_105144 | Not Available | Positive | 1860495 - 1862072 | 60604.3 |
| d-xylose transport system substrate-binding protein | SAMN04487831_105145 | Not Available | Positive | 1862109 - 1863152 | 37492.0 |
| putative multiple sugar transport system substrate-binding protein | SAMN04487831_105146 | Not Available | Positive | 1863327 - 1864448 | 40015.7 |
| putative multiple sugar transport system atp-binding protein | SAMN04487831_105147 | Not Available | Positive | 1864599 - 1866125 | 56008.1 |
| putative multiple sugar transport system permease protein | SAMN04487831_105148 | Not Available | Positive | 1866140 - 1867309 | 41472.8 |
| putative multiple sugar transport system permease protein | SAMN04487831_105149 | Not Available | Positive | 1867327 - 1868508 | 41887.0 |
| radical sam superfamily enzyme, moaa/nifb/pqqe/skfb family | SAMN04487831_105150 | Not Available | Negative | 1868619 - 1870145 | 58628.4 |
| uncharacterized protein yxji | SAMN04487831_105151 | Not Available | Positive | 1870385 - 1870972 | 22253.4 |
| hypothetical protein | SAMN04487831_105152 | Not Available | Positive | 1871052 - 1871585 | 21132.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_105153 | Not Available | Positive | 1871595 - 1871921 | 12634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
