Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN04487831_101161 | Not Available | Positive | 159750 - 161030 | 48040.6 |
| radical sam family uncharacterized protein | SAMN04487831_101162 | Not Available | Positive | 161040 - 162908 | 70592.5 |
| radical sam-linked protein | SAMN04487831_101163 | Not Available | Positive | 162898 - 163614 | 26938.5 |
| ribonuclease g | SAMN04487831_101164 | Not Available | Positive | 163604 - 164488 | 33289.3 |
| micrococcal nuclease | SAMN04487831_101165 | Not Available | Positive | 164525 - 165097 | 21931.6 |
| hypothetical protein | SAMN04487831_101166 | Not Available | Positive | 165122 - 165490 | 14395.8 |
| large subunit ribosomal protein l21 | SAMN04487831_101167 | Not Available | Positive | 165653 - 165961 | 11112.5 |
| hypothetical protein | SAMN04487831_101168 | Not Available | Positive | 165964 - 166290 | 11798.8 |
| lsu ribosomal protein l27p | SAMN04487831_101169 | Not Available | Positive | 166294 - 166578 | 10381.5 |
| gtp-binding protein | SAMN04487831_101170 | Not Available | Positive | 166638 - 167921 | 46771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
