Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_105134 | Not Available | Positive | 1845192 - 1845860 | 25627.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_105135 | Not Available | Positive | 1845910 - 1848486 | 98181.9 |
| enoyl-coa hydratase | SAMN04487831_105136 | Not Available | Positive | 1848572 - 1849375 | 28438.3 |
| protein of unknown function | SAMN04487831_105137 | Not Available | Positive | 1849500 - 1849997 | 18636.9 |
| isoleucyl-trna synthetase | SAMN04487831_105138 | Not Available | Positive | 1850101 - 1853259 | 120395.0 |
| starch phosphorylase | SAMN04487831_105139 | Not Available | Positive | 1853383 - 1855839 | 94860.6 |
| hypothetical protein | SAMN04487831_105140 | Not Available | Positive | 1855857 - 1856741 | 32514.3 |
| hypothetical protein | SAMN04487831_105141 | Not Available | Positive | 1856902 - 1857927 | 38375.1 |
| ribose transport system substrate-binding protein | SAMN04487831_105142 | Not Available | Positive | 1857973 - 1859025 | 39301.1 |
| hamp domain-containing protein | SAMN04487831_105143 | Not Available | Positive | 1859012 - 1860490 | 55603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
