Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_105114 | Not Available | Positive | 1824731 - 1825210 | 17900.9 |
| hypothetical protein | SAMN04487831_105115 | Not Available | Positive | 1825213 - 1826772 | 58158.0 |
| hypothetical protein | SAMN04487831_105116 | Not Available | Positive | 1826800 - 1827432 | 24447.5 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN04487831_105117 | Not Available | Positive | 1827507 - 1828802 | 49392.6 |
| wxg100 family type vii secretion target | SAMN04487831_105118 | Not Available | Positive | 1828820 - 1829104 | 11218.1 |
| wxg100 family type vii secretion target | SAMN04487831_105119 | Not Available | Positive | 1829138 - 1829434 | 10845.7 |
| hypothetical protein | SAMN04487831_105120 | Not Available | Positive | 1829549 - 1829986 | 16518.8 |
| polysaccharide deacetylase | SAMN04487831_105121 | Not Available | Negative | 1830088 - 1831971 | 67620.1 |
| putative abc transport system substrate-binding protein | SAMN04487831_105122 | Not Available | Positive | 1832277 - 1833329 | 37098.7 |
| putative abc transport system permease protein | SAMN04487831_105123 | Not Available | Positive | 1833350 - 1834297 | 33200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
