Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain (group 3) | SAMN04487831_105104 | Not Available | Positive | 1808580 - 1812974 | 163030.0 |
| trypsin-like peptidase domain-containing protein | SAMN04487831_105105 | Not Available | Positive | 1813125 - 1814660 | 55151.7 |
| serine/threonine protein phosphatase prpc | SAMN04487831_105106 | Not Available | Positive | 1814671 - 1815462 | 29066.2 |
| serine/threonine protein kinase | SAMN04487831_105107 | Not Available | Positive | 1815476 - 1817155 | 62868.2 |
| hypothetical protein | SAMN04487831_105108 | Not Available | Positive | 1817164 - 1817655 | 17612.1 |
| fha domain-containing protein | SAMN04487831_105109 | Not Available | Positive | 1817672 - 1818499 | 30663.1 |
| aaa domain-containing protein | SAMN04487831_105110 | Not Available | Positive | 1818511 - 1819569 | 39827.6 |
| uncharacterized ubiquitin-like protein yukd | SAMN04487831_105111 | Not Available | Positive | 1819581 - 1819832 | 9134.88 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04487831_105112 | Not Available | Positive | 1819843 - 1824372 | 170530.0 |
| wxg100 family type vii secretion target | SAMN04487831_105113 | Not Available | Positive | 1824375 - 1824713 | 12610.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
