Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | SAMN04487831_10594 | Not Available | Positive | 1796133 - 1797494 | 48222.3 |
| glycosyl hydrolases family 2 | SAMN04487831_10595 | Not Available | Positive | 1797550 - 1799304 | 67716.8 |
| uncharacterized membrane protein yjjb, duf3815 family | SAMN04487831_10596 | Not Available | Negative | 1799270 - 1799725 | 16352.1 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN04487831_10597 | Not Available | Negative | 1799715 - 1800500 | 28001.6 |
| chromosome partitioning atpase, mrp family, contains fe-s cluster | SAMN04487831_10598 | Not Available | Positive | 1800951 - 1801814 | 30208.4 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04487831_10599 | Not Available | Positive | 1801930 - 1802451 | 19103.7 |
| hypothetical protein | SAMN04487831_105100 | Not Available | Positive | 1802563 - 1803273 | 27340.1 |
| hemolysin, contains cbs domains | SAMN04487831_105101 | Not Available | Negative | 1803236 - 1804510 | 47304.2 |
| tfp pilus assembly protein pilf | SAMN04487831_105102 | Not Available | Positive | 1804687 - 1805640 | 35464.6 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN04487831_105103 | Not Available | Positive | 1805942 - 1808329 | 90310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
