Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10554 | Not Available | Negative | 1755411 - 1755575 | 6082.27 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487831_10555 | Not Available | Negative | 1755795 - 1756496 | 26274.1 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487831_10556 | Not Available | Negative | 1756496 - 1757356 | 32668.0 |
| protein of unknown function | SAMN04487831_10557 | Not Available | Positive | 1757711 - 1758064 | 13783.7 |
| moba/mobl family protein | SAMN04487831_10558 | Not Available | Positive | 1758065 - 1759552 | 58038.2 |
| chc2 zinc finger | SAMN04487831_10559 | Not Available | Positive | 1759565 - 1760182 | 23972.8 |
| virulence-associated protein e | SAMN04487831_10560 | Not Available | Positive | 1760142 - 1761524 | 53071.1 |
| site-specific recombinase xerd | SAMN04487831_10561 | Not Available | Positive | 1761709 - 1763142 | 54863.8 |
| Trna-gly | Not Available | Not Available | Positive | 1763155 - 1763230 | Not Available |
| transglutaminase-like superfamily protein | SAMN04487831_10563 | Not Available | Positive | 1763411 - 1764646 | 45747.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
