Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN04487831_10544 | Not Available | Negative | 1743836 - 1745389 | 56762.4 |
| protein of unknown function | SAMN04487831_10545 | Not Available | Positive | 1745611 - 1746159 | 21362.4 |
| hypothetical protein | SAMN04487831_10546 | Not Available | Positive | 1746835 - 1747731 | 33281.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487831_10547 | Not Available | Positive | 1747877 - 1748440 | 21844.1 |
| protein of unknown function | SAMN04487831_10548 | Not Available | Positive | 1748437 - 1749435 | 36629.0 |
| abc-2 type transport system permease protein | SAMN04487831_10549 | Not Available | Negative | 1750872 - 1751645 | 29884.3 |
| abc-2 type transport system permease protein | SAMN04487831_10550 | Not Available | Negative | 1751645 - 1752427 | 30291.5 |
| abc-2 type transport system atp-binding protein | SAMN04487831_10551 | Not Available | Negative | 1752424 - 1753389 | 36561.6 |
| upf0489 domain-containing protein | SAMN04487831_10552 | Not Available | Negative | 1753386 - 1754189 | 30999.8 |
| ycao-type kinase domain-containing protein | SAMN04487831_10553 | Not Available | Negative | 1754219 - 1755355 | 42357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
