Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN04487831_10534 | Not Available | Positive | 1734246 - 1735070 | 31587.8 |
| lysophospholipase | SAMN04487831_10535 | Not Available | Positive | 1735094 - 1736059 | 37738.3 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04487831_10536 | Not Available | Positive | 1736089 - 1737591 | 55212.5 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04487831_10537 | Not Available | Positive | 1737803 - 1738006 | 7290.43 |
| transglutaminase-like superfamily protein | SAMN04487831_10538 | Not Available | Positive | 1738187 - 1739299 | 42664.2 |
| edd domain protein, degv family | SAMN04487831_10539 | Not Available | Positive | 1739409 - 1740245 | 30556.5 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN04487831_10540 | Not Available | Positive | 1740255 - 1741475 | 44288.1 |
| dnaj domain-containing protein | SAMN04487831_10541 | Not Available | Positive | 1741456 - 1741932 | 17982.6 |
| putative efflux protein, mate family | SAMN04487831_10542 | Not Available | Positive | 1741913 - 1743235 | 47612.4 |
| hypothetical protein | SAMN04487831_10543 | Not Available | Negative | 1743325 - 1743687 | 13877.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
