Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10524 | Not Available | Positive | 1724778 - 1725338 | 21396.0 |
| site-specific dna recombinase | SAMN04487831_10525 | Not Available | Positive | 1725408 - 1727084 | 64334.1 |
| ph domain-containing protein | SAMN04487831_10526 | Not Available | Negative | 1727129 - 1727512 | 14809.6 |
| ribosome biogenesis gtpase | SAMN04487831_10527 | Not Available | Positive | 1727861 - 1728877 | 37798.9 |
| hypothetical protein | SAMN04487831_10528 | Not Available | Positive | 1728864 - 1729067 | 7655.3 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487831_10529 | Not Available | Positive | 1729408 - 1730208 | 30751.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487831_10530 | Not Available | Positive | 1730247 - 1730792 | 20625.4 |
| large conductance mechanosensitive channel | SAMN04487831_10531 | Not Available | Negative | 1730853 - 1731299 | 16013.6 |
| sseb protein n-terminal domain-containing protein | SAMN04487831_10532 | Not Available | Positive | 1731528 - 1732790 | 46365.5 |
| na+/melibiose symporter | SAMN04487831_10533 | Not Available | Positive | 1732830 - 1734161 | 49269.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
