Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mor transcription activator family protein | SAMN04487831_10514 | Not Available | Positive | 1717327 - 1717617 | 11133.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487831_10515 | Not Available | Positive | 1717956 - 1718951 | 38570.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487831_10516 | Not Available | Negative | 1719072 - 1719884 | 30934.0 |
| mobilisation protein (mobc) | SAMN04487831_10517 | Not Available | Positive | 1720092 - 1720442 | 13515.6 |
| hypothetical protein | SAMN04487831_10518 | Not Available | Positive | 1720606 - 1720878 | 10512.4 |
| hypothetical protein | SAMN04487831_10519 | Not Available | Positive | 1720930 - 1721226 | 11486.8 |
| orf6n domain-containing protein | SAMN04487831_10520 | Not Available | Positive | 1721275 - 1722357 | 41299.1 |
| site-specific dna recombinase | SAMN04487831_10521 | Not Available | Positive | 1722371 - 1724062 | 65146.1 |
| hypothetical protein | SAMN04487831_10522 | Not Available | Positive | 1724146 - 1724310 | 6516.04 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487831_10523 | Not Available | Positive | 1724364 - 1724711 | 13002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
