Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_104229 | Not Available | Negative | 1695839 - 1696582 | 27524.7 |
| abc-2 type transport system atp-binding protein | SAMN04487831_104230 | Not Available | Negative | 1696582 - 1697292 | 26374.9 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN04487831_104231 | Not Available | Negative | 1697310 - 1697660 | 13326.0 |
| arac-type dna-binding protein | SAMN04487831_104232 | Not Available | Negative | 1697768 - 1698640 | 33542.4 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN04487831_104233 | Not Available | Positive | 1698997 - 1700292 | 46530.0 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN04487831_104234 | Not Available | Positive | 1700403 - 1701287 | 33158.9 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN04487831_104235 | Not Available | Positive | 1701300 - 1702127 | 30449.6 |
| glycosyl hydrolases family 43 | SAMN04487831_104236 | Not Available | Positive | 1702156 - 1703130 | 37309.0 |
| protein of unknown function | SAMN04487831_1052 | Not Available | Positive | 1703919 - 1704146 | 8758.65 |
| hypothetical protein | SAMN04487831_1053 | Not Available | Positive | 1704173 - 1704364 | 6936.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
