Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| act domain-containing protein | SAMN04487831_104199 | Not Available | Negative | 1663297 - 1663572 | 10146.5 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04487831_104200 | Not Available | Negative | 1663685 - 1664485 | 29238.4 |
| cell division atpase ftsa | SAMN04487831_104201 | Not Available | Negative | 1664570 - 1666663 | 76791.1 |
| dephospho-coa kinase | SAMN04487831_104202 | Not Available | Negative | 1666693 - 1667283 | 22117.5 |
| protein of unknown function | SAMN04487831_104203 | Not Available | Negative | 1667287 - 1668222 | 34342.1 |
| dna polymerase i | SAMN04487831_104204 | Not Available | Negative | 1668304 - 1671009 | 100060.0 |
| xaa-pro aminopeptidase | SAMN04487831_104205 | Not Available | Negative | 1671009 - 1672802 | 66969.7 |
| endoglucanase | SAMN04487831_104206 | Not Available | Negative | 1672799 - 1674118 | 50014.6 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487831_104207 | Not Available | Positive | 1674318 - 1674563 | 9095.88 |
| hypothetical protein | SAMN04487831_104208 | Not Available | Positive | 1674588 - 1674872 | 11197.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
