Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase, n-terminal domain | SAMN04487831_104189 | Not Available | Negative | 1652932 - 1653927 | 34682.9 |
| dihydroxyacetone kinase, phosphotransfer subunit | SAMN04487831_104190 | Not Available | Negative | 1653988 - 1654380 | 13133.7 |
| dihydroxyacetone kinase, c-terminal domain | SAMN04487831_104191 | Not Available | Negative | 1654415 - 1655035 | 21692.9 |
| muramoyltetrapeptide carboxypeptidase ldca (peptidoglycan recycling) | SAMN04487831_104192 | Not Available | Negative | 1655152 - 1656183 | 37980.4 |
| precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04487831_104193 | Not Available | Negative | 1656217 - 1656789 | 20841.1 |
| endo-1,4-beta-xylanase | SAMN04487831_104194 | Not Available | Negative | 1656911 - 1658959 | 76266.7 |
| hypothetical protein | SAMN04487831_104195 | Not Available | Negative | 1659124 - 1659873 | 29012.8 |
| hypothetical protein | SAMN04487831_104196 | Not Available | Negative | 1659985 - 1660695 | 26338.0 |
| hypothetical protein | SAMN04487831_104197 | Not Available | Negative | 1660792 - 1661334 | 21252.7 |
| hypothetical protein | SAMN04487831_104198 | Not Available | Negative | 1661833 - 1663197 | 47990.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
