Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487831_104179 | Not Available | Positive | 1643101 - 1643781 | 25474.7 |
| hypothetical protein | SAMN04487831_104180 | Not Available | Positive | 1643765 - 1644790 | 39262.2 |
| peptidase family s41 | SAMN04487831_104181 | Not Available | Negative | 1644780 - 1646081 | 49824.1 |
| biotin synthase | SAMN04487831_104182 | Not Available | Negative | 1646168 - 1647124 | 35127.3 |
| biotin transport system substrate-specific component | SAMN04487831_104183 | Not Available | Positive | 1647273 - 1647830 | 20458.4 |
| 3-methyladenine dna glycosylase alkd | SAMN04487831_104184 | Not Available | Negative | 1647845 - 1648531 | 27147.7 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04487831_104185 | Not Available | Negative | 1648552 - 1649223 | 25783.8 |
| nitt/taut family transport system atp-binding protein | SAMN04487831_104186 | Not Available | Negative | 1649243 - 1649827 | 21925.6 |
| methyl-accepting chemotaxis protein | SAMN04487831_104187 | Not Available | Negative | 1649903 - 1651885 | 70281.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487831_104188 | Not Available | Negative | 1652037 - 1652855 | 30007.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
