Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_101141 | Not Available | Positive | 141041 - 142555 | 53811.1 |
| atp-dependent dna helicase recg | SAMN04487831_101142 | Not Available | Positive | 142561 - 144609 | 76670.3 |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN04487831_101143 | Not Available | Negative | 144577 - 146328 | 66735.3 |
| tigr00255 family protein | SAMN04487831_101144 | Not Available | Positive | 146444 - 147322 | 33315.1 |
| hypothetical protein | SAMN04487831_101145 | Not Available | Positive | 147325 - 147588 | 9396.35 |
| guanylate kinase | SAMN04487831_101146 | Not Available | Positive | 147578 - 148216 | 24218.0 |
| dna-directed rna polymerase subunit omega | SAMN04487831_101147 | Not Available | Positive | 148219 - 148461 | 8877.61 |
| ribosomal protein s12 methylthiotransferase | SAMN04487831_101148 | Not Available | Positive | 148467 - 149795 | 49807.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN04487831_101149 | Not Available | Positive | 149792 - 150334 | 20313.1 |
| nicotinamide-nucleotide amidase | SAMN04487831_101150 | Not Available | Positive | 150334 - 150813 | 16361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
