Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | SAMN04487831_104169 | Not Available | Negative | 1634311 - 1635981 | 58587.0 |
| 3-isopropylmalate dehydrogenase | SAMN04487831_104170 | Not Available | Negative | 1636000 - 1637091 | 39716.8 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04487831_104171 | Not Available | Positive | 1637269 - 1638060 | 28493.9 |
| hypothetical protein | SAMN04487831_104172 | Not Available | Negative | 1638057 - 1638263 | 7859.87 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487831_104173 | Not Available | Negative | 1638284 - 1638874 | 22130.2 |
| hypothetical protein | SAMN04487831_104174 | Not Available | Negative | 1639048 - 1639746 | 26889.8 |
| protein of unknown function | SAMN04487831_104175 | Not Available | Negative | 1639817 - 1640839 | 37977.6 |
| uncharacterized membrane protein | SAMN04487831_104176 | Not Available | Negative | 1640855 - 1641817 | 37066.1 |
| hypothetical protein | SAMN04487831_104177 | Not Available | Negative | 1641873 - 1642274 | 15200.2 |
| hypothetical protein | SAMN04487831_104178 | Not Available | Negative | 1642377 - 1642967 | 21704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
