Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-trna synthetase | SAMN04487831_104159 | Not Available | Negative | 1621215 - 1622612 | 53759.3 |
| hypothetical protein | SAMN04487831_104160 | Not Available | Negative | 1622652 - 1623431 | 28142.2 |
| dna replication and repair protein reco | SAMN04487831_104161 | Not Available | Negative | 1623428 - 1624153 | 27460.9 |
| gtp-binding protein era | SAMN04487831_104162 | Not Available | Negative | 1624157 - 1625065 | 33549.7 |
| hypothetical protein | SAMN04487831_104163 | Not Available | Negative | 1625075 - 1627981 | 110569.0 |
| small conductance mechanosensitive channel | SAMN04487831_104164 | Not Available | Negative | 1628031 - 1628912 | 32803.5 |
| uncharacterized conserved protein, duf1015 family | SAMN04487831_104165 | Not Available | Negative | 1629083 - 1630318 | 46804.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN04487831_104166 | Not Available | Negative | 1630321 - 1631484 | 41647.1 |
| phosphoserine aminotransferase apoenzyme | SAMN04487831_104167 | Not Available | Negative | 1631484 - 1632566 | 40188.6 |
| acetolactate synthase, large subunit | SAMN04487831_104168 | Not Available | Negative | 1632632 - 1634308 | 60512.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
