Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial peptide chain release factor 1 (brf-1) | SAMN04487831_104149 | Not Available | Negative | 1607365 - 1608438 | 40468.0 |
| release factor glutamine methyltransferase | SAMN04487831_104150 | Not Available | Negative | 1608491 - 1609321 | 30799.9 |
| uncharacterized conserved protein yqhq | SAMN04487831_104151 | Not Available | Negative | 1609321 - 1610250 | 35058.3 |
| lsu ribosomal protein l31p | SAMN04487831_104152 | Not Available | Negative | 1610319 - 1610525 | 7673.09 |
| glycosyl hydrolases family 43 | SAMN04487831_104153 | Not Available | Negative | 1610658 - 1615289 | 169673.0 |
| protein of unknown function | SAMN04487831_104154 | Not Available | Negative | 1615471 - 1615986 | 19472.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN04487831_104155 | Not Available | Negative | 1616013 - 1617164 | 40571.0 |
| transcription termination factor rho | SAMN04487831_104156 | Not Available | Negative | 1617210 - 1618673 | 54852.3 |
| manganese-dependent inorganic pyrophosphatase | SAMN04487831_104157 | Not Available | Negative | 1618844 - 1620490 | 60943.9 |
| hypothetical protein | SAMN04487831_104158 | Not Available | Negative | 1620517 - 1621191 | 25202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
