Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sortase a | SAMN04487831_104139 | Not Available | Negative | 1590983 - 1591864 | 32729.1 |
| sortase a | SAMN04487831_104140 | Not Available | Negative | 1591845 - 1592687 | 31019.2 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04487831_104141 | Not Available | Negative | 1592769 - 1594175 | 50483.7 |
| lpxtg-motif cell wall anchor domain-containing protein/fibro-slime domain-containing protein | SAMN04487831_104142 | Not Available | Negative | 1594189 - 1597818 | 136163.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_104143 | Not Available | Negative | 1598026 - 1599042 | 39339.3 |
| beta-glucosidase | SAMN04487831_104144 | Not Available | Negative | 1599195 - 1602128 | 106499.0 |
| gtra-like protein | SAMN04487831_104145 | Not Available | Negative | 1602153 - 1602707 | 20670.4 |
| beta-glucosidase | SAMN04487831_104146 | Not Available | Negative | 1602708 - 1605065 | 87059.7 |
| ghkl domain-containing protein | SAMN04487831_104147 | Not Available | Negative | 1605165 - 1606526 | 51970.3 |
| two component transcriptional regulator, lyttr family | SAMN04487831_104148 | Not Available | Negative | 1606535 - 1607239 | 26641.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
