Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_104129 | Not Available | Negative | 1577035 - 1578723 | 62678.1 |
| sortase b | SAMN04487831_104130 | Not Available | Negative | 1578864 - 1579985 | 42309.4 |
| hypothetical protein | SAMN04487831_104131 | Not Available | Negative | 1580139 - 1581245 | 39428.2 |
| conserved repeat domain-containing protein | SAMN04487831_104132 | Not Available | Negative | 1581229 - 1582116 | 31717.6 |
| hypothetical protein | SAMN04487831_104133 | Not Available | Negative | 1582133 - 1582846 | 26305.9 |
| hypothetical protein | SAMN04487831_104134 | Not Available | Negative | 1582864 - 1583370 | 18429.8 |
| hypothetical protein | SAMN04487831_104135 | Not Available | Negative | 1583384 - 1584379 | 36128.3 |
| lpxtg-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation d2 domain-containing protein | SAMN04487831_104136 | Not Available | Negative | 1584601 - 1586022 | 51043.1 |
| von willebrand factor type a domain-containing protein | SAMN04487831_104137 | Not Available | Negative | 1586051 - 1589869 | 140153.0 |
| hypothetical protein | SAMN04487831_104138 | Not Available | Negative | 1590127 - 1590969 | 30117.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
