Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l13p | SAMN04487831_104119 | Not Available | Negative | 1567491 - 1567919 | 16173.7 |
| trna pseudouridine38-40 synthase | SAMN04487831_104120 | Not Available | Negative | 1568082 - 1568819 | 27772.4 |
| energy-coupling factor transport system permease protein | SAMN04487831_104121 | Not Available | Negative | 1568821 - 1569621 | 29612.7 |
| energy-coupling factor transport system atp-binding protein | SAMN04487831_104122 | Not Available | Negative | 1569606 - 1571375 | 64766.0 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN04487831_104123 | Not Available | Negative | 1571385 - 1571882 | 18974.6 |
| aminotransferase | SAMN04487831_104124 | Not Available | Negative | 1571875 - 1573044 | 43816.8 |
| dna-binding transcriptional regulator, lrp family | SAMN04487831_104125 | Not Available | Negative | 1573041 - 1573523 | 18176.9 |
| hydrogenase maturation factor | SAMN04487831_104126 | Not Available | Negative | 1573549 - 1574529 | 34681.9 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN04487831_104127 | Not Available | Negative | 1574551 - 1576188 | 58185.8 |
| hypothetical protein | SAMN04487831_104128 | Not Available | Positive | 1576380 - 1576973 | 22639.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
