Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10499 | Not Available | Negative | 1552218 - 1552664 | 17446.6 |
| lactoylglutathione lyase | SAMN04487831_104100 | Not Available | Negative | 1553323 - 1553493 | 6054.14 |
| lactoylglutathione lyase | SAMN04487831_104101 | Not Available | Negative | 1553447 - 1553578 | 5009.0 |
| hypothetical protein | SAMN04487831_104102 | Not Available | Negative | 1553739 - 1554236 | 19255.9 |
| yoap-like | SAMN04487831_104103 | Not Available | Negative | 1554571 - 1555344 | 29425.1 |
| hypothetical protein | SAMN04487831_104104 | Not Available | Negative | 1555347 - 1555469 | 4982.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04487831_104105 | Not Available | Negative | 1555474 - 1556385 | 34607.8 |
| trk system potassium uptake protein trka | SAMN04487831_104106 | Not Available | Negative | 1556743 - 1557393 | 23945.4 |
| trk system potassium uptake protein trkh | SAMN04487831_104107 | Not Available | Negative | 1557404 - 1558768 | 49876.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN04487831_104108 | Not Available | Negative | 1559346 - 1560212 | 33011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
