Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron (metal) dependent repressor, dtxr family | SAMN04487831_10459 | Not Available | Negative | 1511890 - 1512261 | 13843.6 |
| virus attachment protein p12 family protein | SAMN04487831_10460 | Not Available | Negative | 1512290 - 1512469 | 5956.42 |
| ferrous iron transport protein b | SAMN04487831_10461 | Not Available | Negative | 1512493 - 1514886 | 86911.3 |
| ferrous iron transport protein a | SAMN04487831_10462 | Not Available | Negative | 1514889 - 1515116 | 8399.33 |
| ferrous iron transport protein a | SAMN04487831_10463 | Not Available | Negative | 1515135 - 1515347 | 7615.48 |
| fmn-binding domain-containing protein | SAMN04487831_10464 | Not Available | Negative | 1515486 - 1519820 | 153924.0 |
| atp-binding cassette, subfamily b | SAMN04487831_10465 | Not Available | Negative | 1519922 - 1521664 | 64208.1 |
| atp-binding cassette, subfamily b | SAMN04487831_10466 | Not Available | Negative | 1521661 - 1523442 | 64978.6 |
| putative abc transport system permease protein | SAMN04487831_10467 | Not Available | Negative | 1523612 - 1525948 | 89023.7 |
| putative abc transport system atp-binding protein | SAMN04487831_10468 | Not Available | Negative | 1525961 - 1526668 | 26157.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
