Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1495811 - 1495894 | Not Available |
| nadph-dependent fmn reductase | SAMN04487831_10440 | Not Available | Negative | 1496453 - 1497607 | 43542.3 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487831_10441 | Not Available | Negative | 1497683 - 1498453 | 29945.2 |
| dna repair photolyase | SAMN04487831_10442 | Not Available | Negative | 1498661 - 1499539 | 33703.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04487831_10443 | Not Available | Negative | 1499879 - 1500358 | 18795.4 |
| hypothetical protein | SAMN04487831_10444 | Not Available | Negative | 1500393 - 1501220 | 30398.7 |
| conserved hypothetical protein | SAMN04487831_10445 | Not Available | Negative | 1501250 - 1502071 | 30023.1 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04487831_10446 | Not Available | Positive | 1502223 - 1502981 | 28829.4 |
| hypothetical protein | SAMN04487831_10447 | Not Available | Negative | 1503096 - 1503842 | 28999.5 |
| hypothetical protein | SAMN04487831_10448 | Not Available | Negative | 1503869 - 1504663 | 29994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
