Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10428 | Not Available | Negative | 1484094 - 1485641 | 56825.0 |
| 6-phosphofructokinase 1 | SAMN04487831_10429 | Not Available | Negative | 1485675 - 1486919 | 45452.6 |
| hypothetical protein | SAMN04487831_10430 | Not Available | Negative | 1487022 - 1487282 | 9306.76 |
| pap2 superfamily protein | SAMN04487831_10431 | Not Available | Negative | 1487309 - 1487845 | 19320.5 |
| transcriptional regulator, card family | SAMN04487831_10432 | Not Available | Negative | 1487851 - 1488384 | 20076.5 |
| uridine kinase | SAMN04487831_10434 | Not Available | Negative | 1488948 - 1490612 | 62923.2 |
| trna (adenine22-n1)-methyltransferase | SAMN04487831_10435 | Not Available | Negative | 1490627 - 1491334 | 25768.3 |
| rna polymerase primary sigma factor | SAMN04487831_10436 | Not Available | Negative | 1491457 - 1492860 | 53055.9 |
| dna primase | SAMN04487831_10437 | Not Available | Negative | 1492873 - 1494645 | 67279.2 |
| dgtpase | SAMN04487831_10438 | Not Available | Negative | 1494676 - 1495692 | 38886.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
