Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN04487831_103315 | Not Available | Positive | 1442102 - 1442716 | 23353.3 |
| prenyltransferase and squalene oxidase repeat-containing protein | SAMN04487831_103316 | Not Available | Positive | 1442837 - 1443904 | 40993.9 |
| hypothetical protein | SAMN04487831_103317 | Not Available | Positive | 1443907 - 1444125 | 8616.5 |
| s-adenosylmethionine synthetase | SAMN04487831_103318 | Not Available | Positive | 1444672 - 1445213 | 19154.8 |
| dna repair protein rada/sms | SAMN04487831_1042 | Not Available | Negative | 1445920 - 1447305 | 49887.5 |
| hypothetical protein | SAMN04487831_1043 | Not Available | Negative | 1447383 - 1447796 | 14863.7 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04487831_1044 | Not Available | Negative | 1447894 - 1450332 | 89901.5 |
| hypothetical protein | SAMN04487831_1045 | Not Available | Negative | 1450347 - 1451783 | 50498.0 |
| hypothetical protein | SAMN04487831_1046 | Not Available | Negative | 1451899 - 1452090 | 6920.76 |
| right handed beta helix region | SAMN04487831_1047 | Not Available | Negative | 1452261 - 1453610 | 48208.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
