Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103305 | Not Available | Positive | 1431083 - 1432099 | 39619.3 |
| glycosyl transferase family 2 | SAMN04487831_103306 | Not Available | Positive | 1432096 - 1433004 | 34988.7 |
| lipopolysaccharide transport system permease protein | SAMN04487831_103307 | Not Available | Positive | 1433005 - 1433844 | 31409.3 |
| lipopolysaccharide transport system atp-binding protein | SAMN04487831_103308 | Not Available | Positive | 1433847 - 1435115 | 47619.1 |
| methyltransferase domain-containing protein | SAMN04487831_103309 | Not Available | Positive | 1435152 - 1435973 | 32513.5 |
| hypothetical protein | SAMN04487831_103310 | Not Available | Positive | 1436001 - 1437092 | 43022.5 |
| transposase | SAMN04487831_103311 | Not Available | Negative | 1437310 - 1438371 | 39795.7 |
| methyltransferase, fkbm family | SAMN04487831_103312 | Not Available | Positive | 1438636 - 1439730 | 41600.0 |
| cmp-n-acetylneuraminic acid synthetase | SAMN04487831_103313 | Not Available | Positive | 1439807 - 1440463 | 24946.0 |
| 4-hydroxy 2-oxovalerate aldolase | SAMN04487831_103314 | Not Available | Positive | 1440472 - 1442067 | 60642.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
