Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487831_103295 | Not Available | Positive | 1421269 - 1422717 | 54398.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103296 | Not Available | Positive | 1422727 - 1423941 | 46219.0 |
| rhamnosyltransferase | SAMN04487831_103297 | Not Available | Positive | 1423942 - 1424877 | 35803.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103298 | Not Available | Positive | 1424887 - 1425825 | 37099.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04487831_103299 | Not Available | Positive | 1425939 - 1426343 | 15964.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487831_103300 | Not Available | Positive | 1426361 - 1427464 | 41198.2 |
| hypothetical protein | SAMN04487831_103301 | Not Available | Positive | 1427480 - 1428571 | 41236.6 |
| glycosyl transferase family 2 | SAMN04487831_103302 | Not Available | Positive | 1428578 - 1429609 | 40982.5 |
| hypothetical protein | SAMN04487831_103303 | Not Available | Positive | 1429593 - 1430291 | 27119.2 |
| hypothetical protein | SAMN04487831_103304 | Not Available | Positive | 1430288 - 1431070 | 30051.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
