Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_101121 | Not Available | Negative | 122291 - 123349 | 41164.4 |
| electron transport complex protein rnfc | SAMN04487831_101122 | Not Available | Positive | 123517 - 124836 | 47818.2 |
| electron transport complex protein rnfd | SAMN04487831_101123 | Not Available | Positive | 124853 - 125809 | 33831.6 |
| electron transport complex protein rnfg | SAMN04487831_101124 | Not Available | Positive | 125802 - 126425 | 21652.2 |
| electron transport complex protein rnfe | SAMN04487831_101125 | Not Available | Positive | 126418 - 127278 | 30748.0 |
| electron transport complex protein rnfa | SAMN04487831_101126 | Not Available | Positive | 127278 - 127862 | 20636.0 |
| electron transport complex, rnfabcdge type, b subunit | SAMN04487831_101127 | Not Available | Positive | 127876 - 128667 | 26958.9 |
| glutamate 5-kinase | SAMN04487831_101128 | Not Available | Positive | 128823 - 129656 | 30252.1 |
| uncharacterized protein ynzc, upf0291/duf896 family | SAMN04487831_101129 | Not Available | Positive | 129658 - 129879 | 8303.86 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04487831_101130 | Not Available | Positive | 129908 - 130459 | 21227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
